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🧑🏼‍💻 Research - December 16, 2024

Establishing best practices in large language model research: an application to repeat prompting.

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⚡ Quick Summary

This study emphasizes the necessity of establishing best practices in large language model (LLM) research, particularly through the lens of repeat prompting. The findings reveal that failing to account for correlation in model outputs can lead to significant misinterpretations of data, as demonstrated by an intraclass correlation coefficient of 0.69.

🔍 Key Details

  • 📊 Dataset: Data from a prior study on model bias in peer review of medical abstracts
  • 🔍 Methodology: Comparison of methods ignoring correlation vs. random effects method
  • 📈 Key Metric: Intraclass correlation coefficient of 0.69
  • ⚠️ Findings: Over 100-fold inflation of effective sample size when ignoring correlation

🔑 Key Takeaways

  • 📊 Repeat prompting can significantly influence model output correlation.
  • 💡 Ignoring correlation can lead to misleading conclusions in LLM research.
  • 🔄 Effective sample size can be drastically inflated without proper analysis.
  • 🔍 Random effects methods are crucial for accurate data interpretation.
  • 🚨 Urgent need for best practices in LLM research to ensure reliability.
  • 📉 Results reversed from significant findings to no evidence of model bias when accounting for correlation.
  • 🌐 Study published in the Journal of the American Medical Informatics Association.
  • 🆔 PMID: 39656836.

📚 Background

The rapid advancement of large language models (LLMs) has opened new avenues for research and application across various fields, including healthcare. However, as these models become more integrated into critical decision-making processes, the need for robust methodologies and best practices becomes paramount. This study highlights the importance of addressing potential biases and ensuring accurate interpretations of model outputs.

🗒️ Study

The research utilized data from a previous investigation into potential model bias in the peer review of medical abstracts. By comparing different analytical methods, the authors aimed to illustrate the critical role of accounting for correlation in model outputs when employing repeat prompting.

📈 Results

The study found a high correlation within groups when the model was repeatedly prompted, with an intraclass correlation coefficient of 0.69. Ignoring this correlation resulted in an astonishing over 100-fold inflation of the effective sample size, leading to a reversal of findings from a small but significant model bias to no evidence of bias when the correlation was appropriately accounted for.

🌍 Impact and Implications

The implications of this study are profound, as they underscore the necessity for establishing best practices in LLM research. By demonstrating how critical it is to account for repeat prompting in analyses, the authors advocate for a more rigorous approach to research methodologies in the field. This could ultimately enhance the reliability of findings and foster greater trust in LLM applications across various domains.

🔮 Conclusion

This study serves as a vital reminder of the importance of methodological rigor in large language model research. By highlighting the pitfalls of ignoring correlation in model outputs, it calls for the establishment of best practices that can lead to more accurate and trustworthy results. As LLMs continue to evolve, so too must our approaches to studying and applying them.

💬 Your comments

What are your thoughts on the importance of best practices in LLM research? We’d love to hear your insights! 💬 Join the conversation in the comments below or connect with us on social media:

Establishing best practices in large language model research: an application to repeat prompting.

Abstract

OBJECTIVES: We aimed to demonstrate the importance of establishing best practices in large language model research, using repeat prompting as an illustrative example.
MATERIALS AND METHODS: Using data from a prior study investigating potential model bias in peer review of medical abstracts, we compared methods that ignore correlation in model outputs from repeated prompting with a random effects method that accounts for this correlation.
RESULTS: High correlation within groups was found when repeatedly prompting the model, with intraclass correlation coefficient of 0.69. Ignoring the inherent correlation in the data led to over 100-fold inflation of effective sample size. After appropriately accounting for this issue, the authors’ results reverse from a small but highly significant finding to no evidence of model bias.
DISCUSSION: The establishment of best practices for LLM research is urgently needed, as demonstrated in this case where accounting for repeat prompting in analyses was critical for accurate study conclusions.

Author: [‘Gallo RJ’, ‘Baiocchi M’, ‘Savage TR’, ‘Chen JH’]

Journal: J Am Med Inform Assoc

Citation: Gallo RJ, et al. Establishing best practices in large language model research: an application to repeat prompting. Establishing best practices in large language model research: an application to repeat prompting. 2024; (unknown volume):(unknown pages). doi: 10.1093/jamia/ocae294

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